We so far have genomic data for 162 species distributed across the 347 genera of ants (Fig 1.1), covering 27 tribes in 12 subfamilies.
Figure 1.1: Ant genera targeted so far by GAGA
Figure 1.2: Sequencing techniques for different species
Most genomes reach high BUSCO scores (Fig 1.3), both against Hymenoptera (median 97 %) and Eukaryota (median 98 %). A few stLFR-only genomes however are incomplete with BUSCO scores as low as ~70 % (e.g. Gigantiops destructor with 68.3 % complete Hymenoptera BUSCOs).
Figure 1.3: Complete BUSCOs in different species
The assembled genomes vary considerably in size, ranging from 189 MB (Myrmecia croslandi 2n=2) to 594 MB (Odontomachus cf. monticola). Overall, genome size tends to vary most in the Ponerinae and least in the Formicinae. Figure 1.4 gives a complete overview of all so far sequenced species and the respective genome assembly size in Mb.
Figure 1.4: Genome sizes of GAGA genome assemblies
Our sequencing strategy has evolved further, now combining long-read PacBio data, linked-short-read stLFR data and if possible HiC data. We expect that together, these data will yield highly contiguous high quality genome assemblies that should be close to chromosome-resolution for most of the species.
Figure 1.5 gives a rough overview of the quality of the genome assemblies we have so far.
Figure 1.5: Genome assembly quality for GAGA species.
On average, scaffold N50 is 4.505 mega bases (Mb) Currently, the species with the highest scaffold N50 is Plagiolepis pygmaea with 32.91 MB.
Figure 1.6: Genome assembly quality overview for GAGA species.
| GAGA-id | Taxon | Tribe | Subfamily | Sequencing Technique | Genome Size | %BUSCO (Hym) | %BUSCO (Euk) | N50scf | Assembly Status |
|---|---|---|---|---|---|---|---|---|---|
| GAGA-0392 | Leptanilla sp. | Leptanillini | Leptanillinae | stLFR | 224 | 93.3 | 98.0 | 0.13 | Final |
| GAGA-0580 | Probolomyrmex longiscapus | Probolomyrmecini | Proceratiinae | stLFR | 316 | 79.8 | 87.9 | 0.86 | Final |
| GAGA-0535 | Discothyrea kamiteta | Proceratiini | Proceratiinae | stLFR | 233 | 84.1 | 91.8 | 0.02 | Final |
| GAGA-0389 | Proceratium itoi | Proceratiini | Proceratiinae | stLFR | 308 | 81.7 | 87.9 | 0.02 | Final |
| GAGA-0537 | Proceratium cf. bruelheidei | Proceratiini | Proceratiinae | stLFR | 308 | 83.0 | 86.7 | 0.02 | Final |
| GAGA-0536 | Prionopelta kraepelini | Amblyoponini | Amblyoponinae | stLFR | 243 | 75.6 | 79.6 | 0.05 | Final |
| GAGA-0391 | Stigmatomma cf. rubiginoum | Amblyoponini | Amblyoponinae | P/s | 286 | 95.1 | 96.9 | 5.42 | Final |
| GAGA-0404 | Mystrium cf. camillae | Amblyoponini | Amblyoponinae | P/s | 290 | 96.2 | 95.6 | 6.05 | Final |
| GAGA-0090 | Platythyrea punctata | Platythyreini | Ponerinae | P/s | 196 | 96.4 | 98.1 | 4.49 | Final |
| GAGA-0063 | Neoponera goeldii | Ponerini | Ponerinae | P/s | 554 | 95.6 | 98.0 | 8.32 | Final |
| NCBI-0007 | Dinoponera quadriceps | Ponerini | Ponerinae | non-GAGA | 258 | 96.3 | 97.3 | 1.36 | NCBI assembly |
| GAGA-0083 | Diacamma cf. indicum | Ponerini | Ponerinae | P/s | 233 | 93.0 | 93.4 | 17.25 | Final |
| GAGA-0351 | Diacamma rugosum | Ponerini | Ponerinae | P/s | 269 | 96.5 | 98.8 | 7.84 | Final |
| GAGA-0266 | Ectomomyrmex cf. javanus sp2 | Ponerini | Ponerinae | P/s | 434 | 93.4 | 96.5 | 0.81 | Final |
| GAGA-0300 | Ectomomyrmex javanus | Ponerini | Ponerinae | P/s | 470 | 95.8 | 98.5 | 1.82 | Final |
| GAGA-0303 | Harpegnathos venator | Ponerini | Ponerinae | P/s | 324 | 97.2 | 98.5 | 3.00 | Final |
| NCBI-0009 | Harpegnathos saltator | Ponerini | Ponerinae | non-GAGA | 335 | 97.3 | 98.1 | 1.08 | NCBI assembly |
| GAGA-0307 | Hypoponera opacior | Ponerini | Ponerinae | P/s | 251 | 97.0 | 98.5 | 6.95 | Final |
| GAGA-0352 | Leptogenys diminuta | Ponerini | Ponerinae | P/s | 348 | 97.1 | 97.3 | 9.63 | Final |
| GAGA-0380 | Leptogenys cf. kitteli | Ponerini | Ponerinae | P/s | 318 | 97.1 | 98.5 | 6.35 | Final |
| GAGA-0387 | Leptogenys cf. binghamii | Ponerini | Ponerinae | stLFR | 265 | 89.3 | 90.6 | 0.08 | Final |
| GAGA-0408 | Buniapone amblyops | Ponerini | Ponerinae | stLFR | 306 | 94.3 | 98.1 | 0.12 | Final |
| GAGA-0246 | Pseudoneoponera rufipes | Ponerini | Ponerinae | P/s | 305 | 96.8 | 97.7 | 7.76 | Final |
| GAGA-0386 | Euponera pilosior | Ponerini | Ponerinae | stLFR | 397 | 84.2 | 96.5 | 0.05 | Final |
| GAGA-0301 | Anochetus risii | Ponerini | Ponerinae | P/s | 438 | 94.5 | 96.9 | 4.72 | Final |
| GAGA-0074 | Odontomachus hastatus | Ponerini | Ponerinae | P/s | 412 | 96.4 | 99.2 | 3.13 | Final |
| GAGA-0353 | Odontomachus cf. monticola | Ponerini | Ponerinae | P/s | 594 | 95.5 | 97.3 | 2.69 | Final |
| NCBI-0011 | Odontomachus brunneus | Ponerini | Ponerinae | non-GAGA | 393 | 96.5 | 98.9 | 1.76 | NCBI assembly |
| GAGA-0025 | Megaponera analis | Ponerini | Ponerinae | P/s | 312 | 96.4 | 98.1 | 6.45 | Final |
| GAGA-0552 | Paraponera clavata | tr. Paraponerinae | Paraponerinae | P/s | 227 | 96.2 | 95.6 | 6.18 | Final |
| GAGA-0379 | Cerapachys sulcinodis | tr. Dorylinae | Dorylinae | P/s | 315 | 96.8 | 97.7 | 2.37 | Final |
| NCBI-0001 | Ooceraea biroi | tr. Dorylinae | Dorylinae | non-GAGA | 224 | 97.4 | 97.7 | 16.89 | NCBI assembly |
| GAGA-0534 | Dorylus orientalis | tr. Dorylinae | Dorylinae | P/s | 190 | 96.3 | 98.4 | 14.28 | Final |
| GAGA-0577 | Parasyscia sp. | tr. Dorylinae | Dorylinae | stLFR | 241 | 78.6 | 87.5 | 0.02 | Final |
| GAGA-0517 | Myrmecia pilosula | Myrmeciini | Myrmeciinae | P/s | 219 | 98.1 | 98.1 | 11.50 | Final |
| GAGA-0521 | Myrmecia croslandi 2n=2 | Myrmeciini | Myrmeciinae | P/s | 189 | 96.6 | 96.1 | 26.09 | Final, but will be Hi-C scaffolded |
| GAGA-0522 | Myrmecia croslandi 2n=4 | Myrmeciini | Myrmeciinae | P/s | 196 | 98.1 | 98.8 | 21.92 | Final |
| GAGA-0365 | Tetraponera rufonigra | tr. Pseudomyrmecinae | Pseudomyrmecinae | P/s | 251 | 95.3 | 98.1 | 9.03 | Final |
| GAGA-0343 | Pseudomyrmex spinicola | tr. Pseudomyrmecinae | Pseudomyrmecinae | P/s | 263 | 96.9 | 98.1 | 4.52 | Final |
| GAGA-0528 | Liometopum microcephalum | Tapinomini | Dolichoderinae | P/s | 230 | 96.3 | 96.4 | 1.22 | Final |
| GAGA-0337 | Tapinoma melanocephalum | Tapinomini | Dolichoderinae | P/s | 255 | 95.4 | 97.6 | 6.18 | Final |
| GAGA-0340 | Tapinoma cf. melanocephalum | Tapinomini | Dolichoderinae | P/s | 261 | 94.6 | 96.1 | 9.68 | Final |
| NCBI-0010 | Linepithema humile | Leptomyrmecini | Dolichoderinae | non-GAGA | 219 | 97.2 | 98.9 | 1.40 | NCBI assembly |
| GAGA-0302 | Ochetellus glaber | Leptomyrmecini | Dolichoderinae | P/s | 300 | 96.2 | 97.3 | 3.64 | Final |
| GAGA-0363 | Iridomyrmex anceps | Leptomyrmecini | Dolichoderinae | P/s | 224 | 95.7 | 96.1 | 9.59 | Final |
| GAGA-0020 | Lasius flavus sp.2 | Lasiini | Formicinae | P/H | 320 | 95.2 | 95.7 | 5.72 | Final |
| GAGA-0024 | Lasius flavus | Lasiini | Formicinae | P/H/s | 300 | 97.6 | 98.8 | 18.92 | Final |
| GAGA-0177 | Lasius niger | Lasiini | Formicinae | P/H/s | 287 | 96.9 | 96.5 | 19.67 | Final |
| GAGA-0364 | Lasius sp1 | Lasiini | Formicinae | P/s | 251 | 98.0 | 99.6 | 3.58 | Final, validating species ID (Paco) |
| GAGA-0366 | Lasius neglectus | Lasiini | Formicinae | stLFR | 255 | 92.7 | 97.3 | 0.03 | Final |
| GAGA-0491 | Lasius fuliginosus | Lasiini | Formicinae | P/s | 240 | 97.7 | 99.2 | 2.37 | Final |
| GAGA-0524 | Lasius fuliginosus | Lasiini | Formicinae | P/s | 239 | 97.9 | 99.2 | 1.65 | Final |
| GAGA-0532 | Lasius alienus | Lasiini | Formicinae | P/s | 287 | 97.8 | 98.8 | 3.29 | Final |
| GAGA-0026 | Myrmecocystus cf. mendax | Lasiini | Formicinae | P/H | 220 | 98.1 | 99.2 | 14.29 | Final |
| GAGA-0341 | Nylanderia fulva | Lasiini | Formicinae | PacBio | 337 | 97.1 | 98.8 | 2.58 | Final |
| GAGA-0332 | Pseudolasius sp. | Lasiini | Formicinae | P/s | 265 | 95.8 | 96.9 | 4.62 | Final |
| GAGA-0275 | Euprenolepis cf wittei | Lasiini | Formicinae | P/s | 266 | 97.7 | 99.2 | 2.38 | Final |
| GAGA-0350 | Formica fusca | Formicini | Formicinae | P/s | 333 | 95.2 | 94.5 | 2.18 | Final |
| GAGA-0359 | Formica cf. japonica | Formicini | Formicinae | P/s | 389 | 96.6 | 97.6 | 1.78 | Final |
| GAGA-0485 | Formica sanguinea | Formicini | Formicinae | P/s | 348 | 97.6 | 99.6 | 3.98 | Final |
| GAGA-0495 | Formica fusca | Formicini | Formicinae | stLFR | 246 | 94.4 | 97.7 | 0.13 | Final |
| NCBI-0008 | Formica exsecta | Formicini | Formicinae | non-GAGA | 275 | 96.2 | 98.4 | 1.01 | NCBI assembly |
| OUT-0001 | Formica selysi | Formicini | Formicinae | non-GAGA | 290 | 96.9 | 98.0 | 7.92 | NCBI assembly |
| OUT-0002 | Formica cinerea | Formicini | Formicinae | PacBio | 324 | 98.2 | 98.9 | 5.06 | Final |
| GAGA-0502 | Iberoformica subrufa | Formicini | Formicinae | P/s | 290 | 97.9 | 97.7 | 4.81 | Final |
| GAGA-0304 | Proformica cf. mongolica | Formicini | Formicinae | P/s | 257 | 95.4 | 94.9 | 4.70 | Final |
| GAGA-0354 | Cataglyphis aenescens | Formicini | Formicinae | P/s | 279 | 97.7 | 98.4 | 5.34 | Final |
| GAGA-0334 | Rossomyrmex quandratinodum | Formicini | Formicinae | P/s | 251 | 97.5 | 98.8 | 5.05 | Final |
| GAGA-0494 | Rossomyrmex minuchae | Formicini | Formicinae | P/s | 253 | 97.0 | 97.7 | 5.31 | Final |
| GAGA-0336 | Oecophylla smaragdina | Oecophyllini | Formicinae | P/s | 219 | 97.5 | 98.8 | 7.71 | Final |
| GAGA-0199 | Anoplolepis gracilipes | Plagiolepidini | Formicinae | P/s | 253 | 98.1 | 99.2 | 9.15 | Final |
| GAGA-0338 | Lepisiota rothneyi | Plagiolepidini | Formicinae | P/s | 351 | 96.7 | 97.7 | 2.55 | Final |
| GAGA-0187 | Plagiolepis pygmaea | Plagiolepidini | Formicinae | P/H/s | 335 | 96.6 | 97.7 | 32.91 | Final |
| GAGA-0055 | Gigantiops destructor | Gigantiopini | Formicinae | stLFR | 241 | 68.3 | 82.8 | 0.01 | Final |
| GAGA-0406 | Myrmoteras binghamii | Myrmoteratini | Formicinae | stLFR | 283 | 73.0 | 88.3 | 0.01 | Final |
| GAGA-0360 | Colobopsis sp. | Camponotini | Formicinae | P/s | 262 | 98.3 | 99.2 | 9.35 | Final |
| GAGA-0374 | Polyrhachis illaudata | Camponotini | Formicinae | P/s | 274 | 97.8 | 96.9 | 2.41 | Final |
| GAGA-0200 | Camponotus japonicus | Camponotini | Formicinae | P/s | 306 | 98.0 | 97.7 | 1.49 | Final |
| GAGA-0221 | Camponotus fellah | Camponotini | Formicinae | P/H/s | 278 | 98.0 | 98.4 | 12.30 | Final |
| GAGA-0361 | Camponotus cf. fedtschenkoi | Camponotini | Formicinae | P/s | 252 | 98.0 | 98.0 | 9.40 | Final |
| GAGA-0362 | Camponotus sp. | Camponotini | Formicinae | P/s | 284 | 97.8 | 99.2 | 8.31 | Final |
| GAGA-0396 | Camponotus singularis | Camponotini | Formicinae | P/s | 264 | 98.0 | 98.4 | 3.46 | Final |
| NCBI-0005 | Camponotus floridanus | Camponotini | Formicinae | non-GAGA | 284 | 98.5 | 98.4 | 1.59 | NCBI assembly |
| GAGA-0028 | Myrmica rubra | Myrmicini | Myrmicinae | P/s | 477 | 95.2 | 97.3 | 1.45 | Final |
| GAGA-0087 | Myrmica scabrinodis | Myrmicini | Myrmicinae | P/s | 478 | 97.0 | 98.9 | 1.66 | Final |
| GAGA-0401 | Myrmica sp. | Myrmicini | Myrmicinae | P/s | 474 | 96.5 | 97.7 | 0.71 | Final |
| GAGA-0114 | Manica rubida | Myrmicini | Myrmicinae | P/H/s | 331 | 95.5 | 98.9 | 11.52 | Final |
| NCBI-0012 | Pogonomyrmex barbatus | Pogonomyrmecini | Myrmicinae | non-GAGA | 236 | 93.4 | 95.7 | 0.82 | NCBI assembly |
| GAGA-0109 | Stenamma debile | Stenammini | Myrmicinae | P/s | 380 | 96.4 | 95.7 | 2.10 | Final |
| GAGA-0084 | Aphaenogaster subterranea | Stenammini | Myrmicinae | P/s | 415 | 97.4 | 98.1 | 6.51 | Final |
| GAGA-0356 | Aphaenogaster exasperata | Stenammini | Myrmicinae | P/s | 398 | 98.0 | 98.4 | 4.32 | Final |
| GAGA-0531 | Aphaenogaster famelica | Stenammini | Myrmicinae | P/s | 369 | 96.8 | 96.1 | 1.63 | Final |
| GAGA-0004 | Messor barbarus | Stenammini | Myrmicinae | P/s | 313 | 97.5 | 98.4 | 9.08 | Final |
| GAGA-0413 | Messor capitatus | Stenammini | Myrmicinae | P/s | 305 | 98.3 | 98.4 | 11.42 | Final |
| GAGA-0505 | Goniomma hispanicum | Stenammini | Myrmicinae | P/s | 290 | 98.2 | 98.5 | 13.80 | Final |
| GAGA-0503 | Oxyopomyrmex saulcyi | Stenammini | Myrmicinae | P/s | 274 | 98.3 | 98.8 | 10.82 | Final |
| GAGA-0454 | Solenopsis fugax | Solenopsidini | Myrmicinae | P/s | 383 | 97.3 | 98.4 | 2.83 | Final |
| NCBI-0002 | Solenopsis invicta | Solenopsidini | Myrmicinae | non-GAGA | 414 | 98.0 | 98.8 | 13.11 | NCBI assembly |
| GAGA-0245 | Monomorium pharaonis | Solenopsidini | Myrmicinae | P/H/s | 326 | 97.8 | 99.2 | 29.66 | Final, Chr-level |
| GAGA-0346 | Megalomyrmex milenae | Solenopsidini | Myrmicinae | P/H/s | 352 | 97.3 | 98.0 | 10.85 | Final |
| NCBI-0014 | Wasmannia auropunctata | Attini | Myrmicinae | non-GAGA | 306 | 96.6 | 98.1 | 1.42 | NCBI assembly |
| GAGA-0540 | Myrmicocrypta uncinata | Attini | Myrmicinae | P/s | 441 | 95.8 | 95.6 | 1.90 | Final |
| GAGA-0543 | Kalathomyrmex emeryi | Attini | Myrmicinae | P/s | 299 | 97.4 | 98.0 | 6.55 | Final |
| GAGA-0541 | Mycetosoritis hartmanni | Attini | Myrmicinae | P/s | 349 | 94.8 | 96.1 | 4.66 | Final |
| NCBI-0006 | Cyphomyrmex costatus | Attini | Myrmicinae | non-GAGA | 297 | 97.8 | 99.6 | 1.17 | NCBI assembly |
| GAGA-0539 | Mycetophylax morschi | Attini | Myrmicinae | P/s | 309 | 98.1 | 98.4 | 7.84 | Final |
| GAGA-0538 | Sericomyrmex mayri | Attini | Myrmicinae | P/s | 396 | 97.9 | 98.1 | 5.32 | Final |
| GAGA-0550 | Xerolitor explicatus | Attini | Myrmicinae | P/s | 469 | 94.6 | 96.5 | 0.85 | Final |
| NCBI-0015 | Trachymyrmex zeteki | Attini | Myrmicinae | non-GAGA | 267 | 97.5 | 98.0 | 1.33 | NCBI assembly |
| NCBI-0016 | Trachymyrmex septentrionalis | Attini | Myrmicinae | non-GAGA | 290 | 98.0 | 98.8 | 2.52 | NCBI assembly |
| NCBI-0017 | Trachymyrmex cornetzi | Attini | Myrmicinae | non-GAGA | 365 | 97.2 | 98.4 | 0.78 | NCBI assembly |
| GAGA-0001 | Acromyrmex ameliae | Attini | Myrmicinae | P/s | 290 | 96.4 | 98.0 | 8.21 | Final |
| GAGA-0002 | Acromyrmex subterraneus | Attini | Myrmicinae | stLFR | 318 | 80.1 | 89.8 | 0.09 | Final |
| GAGA-0003 | Acromyrmex lobicornis | Attini | Myrmicinae | P/H | 335 | 98.4 | 98.8 | 17.01 | Final |
| GAGA-0014 | Acromyrmex echinatior | Attini | Myrmicinae | PacBio | 296 | 97.2 | 98.1 | 8.27 | Final |
| GAGA-0220 | Acromyrmex octospinosus | Attini | Myrmicinae | stLFR | 315 | 86.1 | 89.0 | 0.30 | Final |
| NCBI-0003 | Atta cephalotes | Attini | Myrmicinae | non-GAGA | 318 | 93.4 | 97.3 | 5.15 | NCBI assembly |
| NCBI-0004 | Atta colombica | Attini | Myrmicinae | non-GAGA | 291 | 98.1 | 98.8 | 2.04 | NCBI assembly |
| GAGA-0080 | Pheidole pallidula | Attini | Myrmicinae | PacBio | 302 | 97.9 | 98.9 | 4.67 | Final |
| GAGA-0358 | Pheidole nodus | Attini | Myrmicinae | P/s | 347 | 97.0 | 97.3 | 5.82 | Final |
| GAGA-0376 | Pheidole capellinii | Attini | Myrmicinae | P/s | 293 | 95.9 | 97.3 | 5.23 | Final |
| GAGA-0384 | Pheidole selathorax | Attini | Myrmicinae | P/s | 275 | 95.1 | 94.6 | 5.30 | Final |
| GAGA-0530 | Pheidole yeensis | Attini | Myrmicinae | P/s | 327 | 97.7 | 99.2 | 3.35 | Final |
| GAGA-0229 | Cephalotes cf minutus | Attini | Myrmicinae | P/s | 408 | 96.2 | 98.1 | 2.79 | Final |
| GAGA-0554 | Strumigenys mutica | Attini | Myrmicinae | stLFR | 233 | 92.6 | 96.5 | 0.06 | Final |
| GAGA-0515 | Cardiocondyla obscurior | Crematogastrini | Myrmicinae | PacBio | 189 | 98.7 | 98.9 | 5.74 | Final |
| GAGA-0328 | Carebara diversa | Crematogastrini | Myrmicinae | P/s | 200 | 98.4 | 99.2 | 4.85 | Final |
| GAGA-0331 | Carebara sp. s2 | Crematogastrini | Myrmicinae | stLFR | 214 | 85.5 | 93.0 | 0.04 | Final |
| GAGA-0378 | Carebara bengalensis | Crematogastrini | Myrmicinae | PacBio | 209 | 95.7 | 95.7 | 6.15 | Final |
| GAGA-0382 | Carebara trechideros | Crematogastrini | Myrmicinae | P/s | 201 | 98.5 | 99.6 | 8.19 | Final |
| GAGA-0533 | Carebara sp. | Crematogastrini | Myrmicinae | P/s | 194 | 98.5 | 99.6 | 7.60 | Final |
| GAGA-0578 | Carebara capreola | Crematogastrini | Myrmicinae | PacBio | 229 | 96.4 | 96.5 | 5.07 | Final |
| GAGA-0579 | Carebara melasolena | Crematogastrini | Myrmicinae | PacBio | 202 | 97.6 | 98.9 | 5.22 | Final |
| GAGA-0520 | Melissotarsus emeryi | Crematogastrini | Myrmicinae | P/s | 387 | 95.6 | 97.7 | 6.49 | Final |
| GAGA-0085 | Tetramorium caespitum | Crematogastrini | Myrmicinae | P/s | 258 | 96.5 | 96.9 | 8.26 | Final |
| GAGA-0333 | Tetramorium bicarinatum | Crematogastrini | Myrmicinae | P/s | 261 | 97.6 | 98.8 | 11.33 | Final |
| GAGA-0405 | Tetramorium sp. | Crematogastrini | Myrmicinae | P/s | 262 | 97.3 | 99.2 | 5.15 | Final |
| GAGA-0527 | Tetramorium “Anergates” atratulus | Crematogastrini | Myrmicinae | P/s | 215 | 96.7 | 98.8 | 11.76 | Final |
| GAGA-0553 | Tetramorium sp. | Crematogastrini | Myrmicinae | stLFR | 238 | 87.1 | 95.3 | 0.03 | Final |
| NCBI-0013 | Vollenhovia emeryi | Crematogastrini | Myrmicinae | non-GAGA | 287 | 97.5 | 98.5 | 1.35 | NCBI assembly |
| GAGA-0330 | Crematogaster cf. rogenhoferi | Crematogastrini | Myrmicinae | P/s | 365 | 97.5 | 97.3 | 2.29 | Final |
| GAGA-0393 | Crematogaster cf. osakensis | Crematogastrini | Myrmicinae | P/s | 263 | 96.9 | 97.3 | 4.28 | Final |
| GAGA-0395 | Crematogaster osakensis | Crematogastrini | Myrmicinae | P/s | 266 | 96.5 | 96.1 | 5.67 | Final |
| GAGA-0335 | Meranoplus cf. bicolor | Crematogastrini | Myrmicinae | P/s | 254 | 97.3 | 98.1 | 5.87 | Final |
| GAGA-0165 | Eutetramorium mocquerysi | Crematogastrini | Myrmicinae | P/s | 237 | 98.4 | 99.3 | 9.23 | Final, additional pacbio data |
| GAGA-0407 | Kartidris sp. | Crematogastrini | Myrmicinae | P/s | 238 | 96.4 | 96.9 | 6.19 | Final |
| GAGA-0256 | Acanthomyrmex ferox | Crematogastrini | Myrmicinae | P/s | 293 | 96.9 | 96.9 | 2.52 | Final |
| GAGA-0103 | Myrmecina graminicola | Crematogastrini | Myrmicinae | P/s | 309 | 95.8 | 96.9 | 1.46 | Final |
| GAGA-0082 | Pristomyrmex punctatus | Crematogastrini | Myrmicinae | P/s | 291 | 96.2 | 98.0 | 8.36 | Final |
| GAGA-0222 | Temnothorax rugatulus | Crematogastrini | Myrmicinae | PacBio | 322 | 95.2 | 97.3 | 1.99 | Final |
| GAGA-0223 | Temnothorax longispinosus | Crematogastrini | Myrmicinae | PacBio | 302 | 95.4 | 96.5 | 1.18 | Final |
| GAGA-0224 | Temnothorax americanus | Crematogastrini | Myrmicinae | PacBio | 256 | 96.2 | 97.7 | 3.89 | Final |
| GAGA-0288 | Temnothorax unifasciatus | Crematogastrini | Myrmicinae | PacBio | 287 | 95.5 | 95.7 | 2.09 | Final |
| GAGA-0510 | Temnothorax nylanderi | Crematogastrini | Myrmicinae | PacBio | 293 | 95.2 | 97.3 | 2.16 | Final |
| GAGA-0511 | Temnothorax ravouxi | Crematogastrini | Myrmicinae | PacBio | 371 | 94.6 | 95.7 | 0.62 | Final |
| GAGA-0512 | Temnothorax pilagens | Crematogastrini | Myrmicinae | PacBio | 310 | 96.0 | 98.1 | 1.98 | Final |
| GAGA-0513 | Temnothorax ambiguus | Crematogastrini | Myrmicinae | PacBio | 303 | 96.0 | 97.7 | 2.33 | Final |
| GAGA-0098 | Harpagoxenus sublaevis | Crematogastrini | Myrmicinae | PacBio | 313 | 95.4 | 96.1 | 2.52 | Final |
| GAGA-0463 | Formicoxenus nitidulus | Crematogastrini | Myrmicinae | P/s | 307 | 97.4 | 98.4 | 4.55 | Final |
| GAGA-0099 | Leptothorax acervorum | Crematogastrini | Myrmicinae | PacBio | 342 | 95.0 | 97.3 | 2.02 | Final |
| GAGA-0306 | Gnamptogenys bicolor | Ectatommini | Ectatomminae | P/s | 320 | 96.1 | 97.3 | 5.06 | Final |
| GAGA-0234 | Typhlomyrmex rogenhoferi | Typhlomyrmecini | Ectatomminae | stLFR | 377 | 91.3 | 94.5 | 0.08 | Final |